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ERP for Pharmaceutical and Nutraceutical Manufacturers

Built on SAP Business One and configured by Third Wave for GMP manufacturers that batch, test, release and ship.

Pharmaceutical ERP that keeps GMP batch records, formulas, lot genealogy, quality release and serialization data in the same system as purchasing, inventory and financials.

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23+
Years of SAP Business One experience
500+
Implementations delivered
8
Third Wave add-ons for SAP Business One
1
System of record from raw material lot to released batch

Why pharma and nutraceutical makers call us

Where batch records, lots and quality release stop fitting in binders

Most small and mid-size pharmaceutical and nutraceutical manufacturers come to us at the same point: the batch record is paper, the formula is a spreadsheet, quality release is a signature on a form, and lot genealogy is reconstructed when an auditor or a recall demands it.

SAP Business One for pharmaceutical manufacturing replaces that patchwork with one system for formulas and batch production, lot genealogy, expiry and quarantine, QC testing and release, serialization data, purchasing, inventory, sales and financials, with the audit trail built in.

Gloved worker handles glass vials as an automated machine heats and seals them.

Requirements

What a pharmaceutical ERP has to handle

Eight areas where pharma ERP software earns its keep, and the ones we configure first.

GMP batch records

The batch record assembled from the production order as it runs: materials issued by lot, steps completed, checks passed, signatures captured.

Formulas and potency

Formulas by weight and volume with potency-adjusted quantities, yield and scaling to the batch.

Lot genealogy

Every raw material lot traced into every batch and out to every shipment, in both directions, in minutes.

Expiry, quarantine and release

Shelf life on every lot, quarantine until QC release, and first-expired-first-out picking.

QC testing and certificates of analysis

Test results against the lot, release or reject decisions, and the certificate of analysis printed from the system.

21 CFR Part 11 audit trails

Who changed what and when on every controlled record, with electronic signatures where the procedure requires them.

DSCSA serialization support

Serial and lot data held and exchanged for the transactions the Drug Supply Chain Security Act covers.

Supplier qualification and deviations

Approved suppliers by material, deviations and CAPAs tracked to closure.

Pharma ERP modules

Pharma ERP modules, in one database

Formulation, production, quality, inventory, purchasing, sales and distribution, and finance run in one SAP Business One company database rather than as separate modules stitched together, so a lot number means the same thing in the warehouse, the lab and the ledger.

SAP Business One supports compliance; validation stays with the manufacturer. We document the configuration so the IQ, OQ and PQ package is straightforward.

Workers in blue protective clothing and gloves handle packaged items on a production line.

The Third Wave build

SAP Business One for pharmaceutical manufacturers: how we configure it

SAP Business One already covers formulas, production, quality, inventory, purchasing, sales and financials. What makes it a pharma ERP is the configuration and the add-ons around it. A typical Third Wave pharma build includes:

  • WiSys WMS for directed picking, putaway and cycle counts on RF scanners
  • ShipEasy for carrier rate shopping and shipping labels inside SAP Business One
  • Versago customer and rep portals for self-service orders, invoices and order history
  • BizWeaver for EDI, Shopify, Amazon and 3PL integrations
  • CreditCard for taking payments on orders and invoices
  • Forge AI for plain-English questions about orders, inventory and margin, and data capture at the point of work
  • Managed cloud hosting for SAP Business One, or on-premise if that is where you need it
  • BatchMaster for SAP Business One for batch BOMs, batch production, potency adjustment and electronic batch records

Every build starts with your formulas, your quality procedures and your lot rules, not a template.

Gloved hands arrange green capsules in rows on a blue pharmaceutical filling tray.

Sub-sectors

Pharma, biotech and nutraceutical companies this fits

Different products, the same operating problems: batches that have to trace, releases that have to be signed, and documents that have to match.

Generic and OTC manufacturers

Formulas, batch records and lot genealogy under GMP.

Supplement and nutraceutical makers

Potency, expiry and label claims held on the item and the lot.

Contract manufacturers and CDMOs

Customer-owned formulas, batch records per customer, and job costing per run.

Biotech and diagnostics

Zeus Scientific, an FDA-regulated diagnostics manufacturer, runs production tracking and shipping on SAP Business One.

Pharma distributors

Lot and expiry tracking, serialization data exchange and recall reports across every customer shipped.

Food-grade supplements and beverages

Recipes, allergens and FEFO for makers on the food side of the line.

Client results

Results from regulated manufacturers

FDA-regulated production on SAP Business One.

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Medical DevicesManufacturing
SAP Business One

Zeus Scientific

Zeus Scientific automates order processing on SAP Business One

Medical diagnostic test kit maker Zeus Scientific automated order entry, allocation and pick lists on SAP Business One with Third Wave, and grew without adding much headcount.

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How to choose

Choosing a pharma ERP

Most lists of the best ERP for the pharmaceutical industry rank vendors. The better test is whether the system can run the batch record as production happens and trace a lot in minutes. Five questions settle it.

  1. Where does the batch record come from?

    From the production order as it runs, or from a binder assembled afterwards. Only one of those survives an inspection.

  2. Can you trace a lot forward and back in minutes?

    Ask for a mock recall in the demo, on your own materials.

  3. Does QC release gate the warehouse?

    Nothing picks until the lot is released, enforced by the system rather than by a label.

  4. What does it cost, all in?

    Licenses, implementation, add-ons and hosting. Our SAP Business One pricing guide lays out the ranges for a pharmaceutical manufacturer and what moves them.

  5. How long until go-live, and who has done it under GMP?

    Validation and the migration of formulas and lot history move the date more than company size. Our implementation timeline guide covers the phases.

Questions pharma makers ask first

Pharmaceutical ERP, answered plainly

It supports compliance with both: audit trails on controlled records, electronic signatures where configured, access controls, and batch records built from the production order. Validation of the configured system against your procedures stays with the manufacturer, and we document the configuration for that package.

Reading for regulated manufacturers

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Input Costs at 77.9 and Rising: This Month in Manufacturing

The ISM Prices Index hit 77.9 in September as new orders climbed for the ninth straight month. Tariffs, the QPP year-end tax deadline, and the RaaS automation shift: what mid-market manufacturers need to track in Q4.

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SAP Business One Implementation Guide: Phases, Timeline and Cost

Every SAP Business One implementation moves through the same five phases. This guide explains each one, with durations, deliverables, costs and the decisions that move the go-live date.

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